Browse FILER

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Description of FILER metadata columns (XLS): FILER_v1_metadata_schema.xlsx.

For descriptions of the main output data types and data terms, please see data glossary, data terms, and references therein. For additional information, please also see data Summary page (‘Data description’ tab) and the About page.

#Identifier Data Source Download file Number of intervals bp covered Output type Genome build cell type Biosample type Biosamples term id Tissue category ENCODE Experiment id Biological replicate(s) Technical replicate Antibody Assay File format File size Release date Date added to FILER Data Category Genomic feature type Track Description system category life stage trackName
NGEN000260 ENCODE Download 235,562 33,682,828 peaks hg19 A549 Cell line EFO:0001086 Lung ENCSR000DBS 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 3,357,825 3/21/11 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=A549;Lab=Jason Lieb, UNC;System=respiratory system;Submitted_track_name=wgEncodeOpenChromFaireA549Pk.narrowPeak.bigBed Respiratory Unknown ENCODE A549 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DBS] [Orig: Biosample_summary=A549;Lab=Jason Lieb, UNC;System=respiratory system;Submitted_track_name=wgEncodeOpenChromFaireA549Pk.narrowPeak.bigBed] [Life stage: Unknown]
NGEN000261 ENCODE Download 258,813 48,201,112 peaks hg19 Colon Tissue UBERON:0001155 Digestive ENCSR000DBU 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 3,856,192 9/19/12 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=Colon tissue female adult (72 years) and male adult (43 years);Lab=Jason Lieb, UNC;System=digestive system;Submitted_track_name=wgEncodeOpenChromFaireColonocPk.narrowPeak.bigBed Digestive Adult ENCODE Colon (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DBU] [Orig: Biosample_summary=Colon tissue female adult (72 years) and male adult (43 years);Lab=Jason Lieb, UNC;System=digestive system;Submitted_track_name=wgEncodeOpenChromFaireColonocPk.narrowPeak.bigBed] [Life stage: Adult]
NGEN000262 ENCODE Download 220,677 46,623,365 peaks hg19 Endometrium Tissue UBERON:0001295 Female Reproductive ENCSR000DBV 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 3,382,330 9/19/12 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=Endometrium tissue female adult (22 years) and female adult (28 years);Lab=Jason Lieb, UNC;System=reproductive system;Submitted_track_name=wgEncodeOpenChromFaireEndometriumocPk.narrowPeak.bigBed Reproductive Adult ENCODE Endometrium (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DBV] [Orig: Biosample_summary=Endometrium tissue female adult (22 years) and female adult (28 years);Lab=Jason Lieb, UNC;System=reproductive system;Submitted_track_name=wgEncodeOpenChromFaireEndometriumocPk.narrowPeak.bigBed] [Life stage: Adult]
NGEN000263 ENCODE Download 275,286 57,244,269 peaks hg19 Frontal cortex Tissue UBERON:0001870 Brain ENCSR000DBW 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 4,266,094 9/19/12 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=Frontal cortex tissue female adult (67 years) and female adult (80 years);Lab=Jason Lieb, UNC;System=central nervous system;Submitted_track_name=wgEncodeOpenChromFaireFrontalcortexocPk.narrowPeak.bigBed Nervous Adult ENCODE Frontal cortex (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DBW] [Orig: Biosample_summary=Frontal cortex tissue female adult (67 years) and female adult (80 years);Lab=Jason Lieb, UNC;System=central nervous system;Submitted_track_name=wgEncodeOpenChromFaireFrontalcortexocPk.narrowPeak.bigBed] [Life stage: Adult]
NGEN000264 ENCODE Download 198,618 40,532,154 peaks hg19 H54 Cell line EFO:0002782 Brain ENCSR000DBX 1, 2, 3 1_1 ,2_1,3_1 Not applicable FAIRE-seq bed narrowPeak 2,955,020 3/21/11 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=H54;Lab=Jason Lieb, UNC;System=central nervous system;Submitted_track_name=wgEncodeOpenChromFaireGlioblaPk.narrowPeak.bigBed Nervous Unknown ENCODE H54 (repl. 1, 2, 3) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DBX] [Orig: Biosample_summary=H54;Lab=Jason Lieb, UNC;System=central nervous system;Submitted_track_name=wgEncodeOpenChromFaireGlioblaPk.narrowPeak.bigBed] [Life stage: Unknown]
NGEN000265 ENCODE Download 127,367 18,925,732 peaks hg19 GM12878 Cell line EFO:0002784 Blood ENCSR000DBY 1, 2, 3 1_1 ,2_1,3_1 Not applicable FAIRE-seq bed narrowPeak 1,874,080 3/21/11 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=GM12878;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireGm12878Pk.narrowPeak.bigBed Cardiovascular Unknown ENCODE GM12878 (repl. 1, 2, 3) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DBY] [Orig: Biosample_summary=GM12878;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireGm12878Pk.narrowPeak.bigBed] [Life stage: Unknown]
NGEN000266 ENCODE Download 213,149 46,886,875 peaks hg19 GM12891 Cell line EFO:0002785 Blood ENCSR000DBZ 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 3,235,535 3/21/11 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=GM12891;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireGm12891Pk.narrowPeak.bigBed Cardiovascular Unknown ENCODE GM12891 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DBZ] [Orig: Biosample_summary=GM12891;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireGm12891Pk.narrowPeak.bigBed] [Life stage: Unknown]
NGEN000267 ENCODE Download 207,309 42,436,939 peaks hg19 GM12892 Cell line EFO:0002786 Blood ENCSR000DCA 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 3,113,308 3/21/11 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=GM12892;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireGm12892Pk.narrowPeak.bigBed Cardiovascular Unknown ENCODE GM12892 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCA] [Orig: Biosample_summary=GM12892;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireGm12892Pk.narrowPeak.bigBed] [Life stage: Unknown]
NGEN000268 ENCODE Download 170,163 41,118,043 peaks hg19 GM18507 Cell line EFO:0002787 Blood ENCSR000DCB 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 2,663,353 3/21/11 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=GM18507;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireGm18507Pk.narrowPeak.bigBed Cardiovascular Unknown ENCODE GM18507 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCB] [Orig: Biosample_summary=GM18507;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireGm18507Pk.narrowPeak.bigBed] [Life stage: Unknown]
NGEN000269 ENCODE Download 225,806 49,221,268 peaks hg19 GM19239 Cell line EFO:0002789 Blood ENCSR000DCC 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 3,444,266 3/21/11 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=GM19239;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireGm19239Pk.narrowPeak.bigBed Cardiovascular Unknown ENCODE GM19239 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCC] [Orig: Biosample_summary=GM19239;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireGm19239Pk.narrowPeak.bigBed] [Life stage: Unknown]
NGEN000270 ENCODE Download 111,389 15,874,460 peaks hg19 H1-hESC Stem cell EFO:0003042 Stem Cell ENCSR000DCD 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 1,636,853 3/21/11 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=H1;Lab=Jason Lieb, UNC;Submitted_track_name=wgEncodeOpenChromFaireH1hescPk.narrowPeak.bigBed Stem Cell Unknown ENCODE H1-hESC (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCD] [Orig: Biosample_summary=H1;Lab=Jason Lieb, UNC;Submitted_track_name=wgEncodeOpenChromFaireH1hescPk.narrowPeak.bigBed] [Life stage: Unknown]
NGEN000271 ENCODE Download 287,494 56,486,922 peaks hg19 HeLa-S3 Cell line EFO:0002791 Female Reproductive ENCSR000DCF 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 4,343,900 3/21/11 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=HeLa-S3 treated with interferon alpha for 4 hours;Lab=Jason Lieb, UNC;System=reproductive system;Submitted_track_name=wgEncodeOpenChromFaireHelas3Ifna4hPk.narrowPeak.bigBed Reproductive Unknown ENCODE HeLa-S3 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCF] [Orig: Biosample_summary=HeLa-S3 treated with interferon alpha for 4 hours;Lab=Jason Lieb, UNC;System=reproductive system;Submitted_track_name=wgEncodeOpenChromFaireHelas3Ifna4hPk.narrowPeak.bigBed] [Life stage: Unknown]
NGEN000272 ENCODE Download 260,494 56,107,652 peaks hg19 HeLa-S3 Cell line EFO:0002791 Female Reproductive ENCSR000DCE 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 3,992,633 3/21/11 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=HeLa-S3 treated with 5 ng/mL Interferon gamma for 4 hours;Lab=Jason Lieb, UNC;System=reproductive system;Submitted_track_name=wgEncodeOpenChromFaireHelas3Ifng4hPk.narrowPeak.bigBed Reproductive Unknown ENCODE HeLa-S3 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCE] [Orig: Biosample_summary=HeLa-S3 treated with 5 ng/mL Interferon gamma for 4 hours;Lab=Jason Lieb, UNC;System=reproductive system;Submitted_track_name=wgEncodeOpenChromFaireHelas3Ifng4hPk.narrowPeak.bigBed] [Life stage: Unknown]
NGEN000273 ENCODE Download 125,776 19,086,459 peaks hg19 HeLa-S3 Cell line EFO:0002791 Female Reproductive ENCSR000DCG 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 1,894,710 3/21/11 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=HeLa-S3;Lab=Jason Lieb, UNC;System=reproductive system;Submitted_track_name=wgEncodeOpenChromFaireHelas3Pk.narrowPeak.bigBed Reproductive Unknown ENCODE HeLa-S3 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCG] [Orig: Biosample_summary=HeLa-S3;Lab=Jason Lieb, UNC;System=reproductive system;Submitted_track_name=wgEncodeOpenChromFaireHelas3Pk.narrowPeak.bigBed] [Life stage: Unknown]
NGEN000274 ENCODE Download 100,084 21,540,296 peaks hg19 HepG2 Cell line EFO:0001187 Liver ENCSR000DCH 1, 2, 3 1_1 ,2_1,3_1 Not applicable FAIRE-seq bed narrowPeak 1,561,648 3/21/11 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=HepG2;Lab=Jason Lieb, UNC;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeOpenChromFaireHepg2Pk.narrowPeak.bigBed Digestive Unknown ENCODE HepG2 (repl. 1, 2, 3) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCH] [Orig: Biosample_summary=HepG2;Lab=Jason Lieb, UNC;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeOpenChromFaireHepg2Pk.narrowPeak.bigBed] [Life stage: Unknown]
NGEN000275 ENCODE Download 197,109 43,014,077 peaks hg19 HTR-8/SVneo Cell line EFO:0005709 Embryo ENCSR000DCI 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 2,954,590 3/21/11 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=HTR-8/SVneo;Lab=Jason Lieb, UNC;System=reproductive system;Submitted_track_name=wgEncodeOpenChromFaireHtr8Pk.narrowPeak.bigBed Embryo Embryonic ENCODE HTR-8/SVneo (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCI] [Orig: Biosample_summary=HTR-8/SVneo;Lab=Jason Lieb, UNC;System=reproductive system;Submitted_track_name=wgEncodeOpenChromFaireHtr8Pk.narrowPeak.bigBed] [Life stage: Embryonic]
NGEN000276 ENCODE Download 209,101 46,722,106 peaks hg19 Endothelial cell Primary cell CL:0002618 Umbilical Cord ENCSR000DCJ 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 3,254,844 3/21/11 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=Endothelial cell of umbilical vein newborn;Lab=Jason Lieb, UNC;System=circulatory system,reproductive system;Submitted_track_name=wgEncodeOpenChromFaireHuvecPk.narrowPeak.bigBed;previous_filer_cell_type=Endothelial cell of umbilical vein;tissue_of_origin=Umbilical vein;premapping_cell_type=Endothelial cell - umbilical vein Embryo Newborn ENCODE Endothelial cell (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCJ] [Orig: Biosample_summary=Endothelial cell of umbilical vein newborn;Lab=Jason Lieb, UNC;System=circulatory system,reproductive system;Submitted_track_name=wgEncodeOpenChromFaireHuvecPk.narrowPeak.bigBed;previous_filer_cell_type=Endothelial cell of umbilical vein;tissue_of_origin=Umbilical vein;premapping_cell_type=Endothelial cell - umbilical vein] [Life stage: Newborn]
NGEN000277 ENCODE Download 137,373 16,591,883 peaks hg19 K562 Cell line EFO:0002067 Blood ENCSR000DCL 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 1,953,808 3/21/11 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=K562 treated with 500 ?M sodium butyrate for 72 hours;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireK562NabutPk.narrowPeak.bigBed Cardiovascular Unknown ENCODE K562 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCL] [Orig: Biosample_summary=K562 treated with 500 ?M sodium butyrate for 72 hours;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireK562NabutPk.narrowPeak.bigBed] [Life stage: Unknown]
NGEN000278 ENCODE Download 147,194 18,283,774 peaks hg19 K562 Cell line EFO:0002067 Blood ENCSR000DCK 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 2,101,662 3/21/11 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=K562 treated with 100 ?M hydroxyurea for 72 hours;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireK562OhureaPk.narrowPeak.bigBed Cardiovascular Unknown ENCODE K562 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCK] [Orig: Biosample_summary=K562 treated with 100 ?M hydroxyurea for 72 hours;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireK562OhureaPk.narrowPeak.bigBed] [Life stage: Unknown]
NGEN000279 ENCODE Download 170,026 34,022,076 peaks hg19 K562 Cell line EFO:0002067 Blood ENCSR000DCM 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 2,604,975 3/21/11 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=K562;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireK562Pk.narrowPeak.bigBed Cardiovascular Unknown ENCODE K562 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCM] [Orig: Biosample_summary=K562;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireK562Pk.narrowPeak.bigBed] [Life stage: Unknown]
NGEN000280 ENCODE Download 287,593 59,591,482 peaks hg19 Kidney Tissue UBERON:0002113 Urinary ENCSR000DCN 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 4,457,117 9/19/12 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=Kidney tissue female adult (30 years) and male adult (54 years);Lab=Jason Lieb, UNC;System=excretory system;Submitted_track_name=wgEncodeOpenChromFaireKidneyocPk.narrowPeak.bigBed Renal Adult ENCODE Kidney (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCN] [Orig: Biosample_summary=Kidney tissue female adult (30 years) and male adult (54 years);Lab=Jason Lieb, UNC;System=excretory system;Submitted_track_name=wgEncodeOpenChromFaireKidneyocPk.narrowPeak.bigBed] [Life stage: Adult]
NGEN000281 ENCODE Download 274,410 46,072,866 peaks hg19 MCF-7 Cell line EFO:0001203 Breast ENCSR000DCQ 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 3,965,792 9/19/12 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=MCF-7 treated with 10 nM 17?-estradiol for 30 minutes;Lab=Jason Lieb, UNC;System=integumental system,exocrine system;Submitted_track_name=wgEncodeOpenChromFaireMcf7Est10nm30mPk.narrowPeak.bigBed Reproductive Unknown ENCODE MCF-7 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCQ] [Orig: Biosample_summary=MCF-7 treated with 10 nM 17?-estradiol for 30 minutes;Lab=Jason Lieb, UNC;System=integumental system,exocrine system;Submitted_track_name=wgEncodeOpenChromFaireMcf7Est10nm30mPk.narrowPeak.bigBed] [Life stage: Unknown]
NGEN000282 ENCODE Download 201,809 34,918,028 peaks hg19 MCF-7 Cell line EFO:0001203 Breast ENCSR000DCS 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 2,919,840 3/21/11 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=MCF-7 treated with 10 mM lactate for 24 hours;Lab=Jason Lieb, UNC;System=integumental system,exocrine system;Submitted_track_name=wgEncodeOpenChromFaireMcf7HypoxlacPk.narrowPeak.bigBed Reproductive Unknown ENCODE MCF-7 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCS] [Orig: Biosample_summary=MCF-7 treated with 10 mM lactate for 24 hours;Lab=Jason Lieb, UNC;System=integumental system,exocrine system;Submitted_track_name=wgEncodeOpenChromFaireMcf7HypoxlacPk.narrowPeak.bigBed] [Life stage: Unknown]
NGEN000283 ENCODE Download 246,292 36,908,737 peaks hg19 MCF-7 Cell line EFO:0001203 Breast ENCSR000DCR 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 3,509,093 9/19/12 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=MCF-7;Lab=Jason Lieb, UNC;System=integumental system,exocrine system;Submitted_track_name=wgEncodeOpenChromFaireMcf7VehPk.narrowPeak.bigBed Reproductive Unknown ENCODE MCF-7 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCR] [Orig: Biosample_summary=MCF-7;Lab=Jason Lieb, UNC;System=integumental system,exocrine system;Submitted_track_name=wgEncodeOpenChromFaireMcf7VehPk.narrowPeak.bigBed] [Life stage: Unknown]
NGEN000284 ENCODE Download 231,372 50,489,628 peaks hg19 Medulloblastoma Cell line EFO:0002939 Brain ENCSR000DCT 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 3,372,817 3/21/11 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=D721Med;Lab=Jason Lieb, UNC;System=central nervous system;Submitted_track_name=wgEncodeOpenChromFaireMedulloPk.narrowPeak.bigBed Nervous Unknown ENCODE Medulloblastoma (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCT] [Orig: Biosample_summary=D721Med;Lab=Jason Lieb, UNC;System=central nervous system;Submitted_track_name=wgEncodeOpenChromFaireMedulloPk.narrowPeak.bigBed] [Life stage: Unknown]
NGEN000285 ENCODE Download 296,168 66,794,045 peaks hg19 A204.1 Cell line EFO:0005702 Skeletal Muscle ENCSR000DCU 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 4,588,479 9/19/12 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=A204.1;Lab=Jason Lieb, UNC;System=musculature;Submitted_track_name=wgEncodeOpenChromFaireMrta2041Pk.narrowPeak.bigBed Muscular Unknown ENCODE A204.1 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCU] [Orig: Biosample_summary=A204.1;Lab=Jason Lieb, UNC;System=musculature;Submitted_track_name=wgEncodeOpenChromFaireMrta2041Pk.narrowPeak.bigBed] [Life stage: Unknown]
NGEN000286 ENCODE Download 270,181 65,249,085 peaks hg19 G-401.6 Cell line EFO:0005703 Urinary ENCSR000DCV 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 4,225,063 9/19/12 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=G401.6;Lab=Jason Lieb, UNC;System=excretory system;Submitted_track_name=wgEncodeOpenChromFaireMrtg4016Pk.narrowPeak.bigBed;premapping_cell_type=G401.6 Renal Unknown ENCODE G-401.6 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCV] [Orig: Biosample_summary=G401.6;Lab=Jason Lieb, UNC;System=excretory system;Submitted_track_name=wgEncodeOpenChromFaireMrtg4016Pk.narrowPeak.bigBed;premapping_cell_type=G401.6] [Life stage: Unknown]
NGEN000287 ENCODE Download 132,741 34,584,719 peaks hg19 TTC549 Cell line EFO:0005700 Liver ENCSR000DCW 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 2,124,242 9/19/12 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=TTC549;Lab=Jason Lieb, UNC;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeOpenChromFaireMrtttc549Pk.narrowPeak.bigBed Digestive Unknown ENCODE TTC549 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCW] [Orig: Biosample_summary=TTC549;Lab=Jason Lieb, UNC;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeOpenChromFaireMrtttc549Pk.narrowPeak.bigBed] [Life stage: Unknown]
NGEN000288 ENCODE Download 273,110 45,721,104 peaks hg19 Astrocyte Primary cell CL:0000127 Brain ENCSR000DBT 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 4,005,283 3/21/11 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=Astrocyte;Lab=Jason Lieb, UNC;System=central nervous system;Submitted_track_name=wgEncodeOpenChromFaireNhaPk.narrowPeak.bigBed Nervous Unknown ENCODE Astrocyte (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DBT] [Orig: Biosample_summary=Astrocyte;Lab=Jason Lieb, UNC;System=central nervous system;Submitted_track_name=wgEncodeOpenChromFaireNhaPk.narrowPeak.bigBed] [Life stage: Unknown]
NGEN000289 ENCODE Download 194,524 24,142,984 peaks hg19 Epithelial cell Primary cell CL:0002328 Lung ENCSR000DCX 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 2,796,537 3/21/11 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=Bronchial epithelial cell female;Lab=Jason Lieb, UNC;System=respiratory system;Submitted_track_name=wgEncodeOpenChromFaireNhbePk.narrowPeak.bigBed;previous_filer_cell_type=Bronchial epithelial cell;tissue_of_origin=Bronchial;premapping_cell_type=Epithelial cell - bronchial Respiratory Unknown ENCODE Epithelial cell (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCX] [Orig: Biosample_summary=Bronchial epithelial cell female;Lab=Jason Lieb, UNC;System=respiratory system;Submitted_track_name=wgEncodeOpenChromFaireNhbePk.narrowPeak.bigBed;previous_filer_cell_type=Bronchial epithelial cell;tissue_of_origin=Bronchial;premapping_cell_type=Epithelial cell - bronchial] [Life stage: Unknown]
NGEN000290 ENCODE Download 181,758 35,463,421 peaks hg19 Keratinocyte Primary cell CL:0000312 Skin ENCSR000DCY 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 2,753,293 3/21/11 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=Keratinocyte female;Lab=Jason Lieb, UNC;System=integumental system;Submitted_track_name=wgEncodeOpenChromFaireNhekPk.narrowPeak.bigBed Integumentary Unknown ENCODE Keratinocyte (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCY] [Orig: Biosample_summary=Keratinocyte female;Lab=Jason Lieb, UNC;System=integumental system;Submitted_track_name=wgEncodeOpenChromFaireNhekPk.narrowPeak.bigBed] [Life stage: Unknown]
NGEN000291 ENCODE Download 241,782 48,102,725 peaks hg19 Pancreas Tissue UBERON:0001264 Digestive ENCSR000DCZ 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 3,656,618 9/19/12 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=Pancreas tissue male adult (54 years) and male adult (60 years);Lab=Jason Lieb, UNC;Submitted_track_name=wgEncodeOpenChromFairePancreasocPk.narrowPeak.bigBed Digestive Adult ENCODE Pancreas (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCZ] [Orig: Biosample_summary=Pancreas tissue male adult (54 years) and male adult (60 years);Lab=Jason Lieb, UNC;Submitted_track_name=wgEncodeOpenChromFairePancreasocPk.narrowPeak.bigBed] [Life stage: Adult]
NGEN000292 ENCODE Download 241,417 35,725,727 peaks hg19 Islet - langerhans Tissue UBERON:0000006 Digestive ENCSR000DDA 1 1_1 Not applicable FAIRE-seq bed narrowPeak 3,542,638 3/21/11 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=Islet of Langerhans tissue;Lab=Jason Lieb, UNC;System=endocrine system;Submitted_track_name=wgEncodeOpenChromFairePanisletsPk.narrowPeak.bigBed Digestive Unknown ENCODE Islet - langerhans (repl. 1) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DDA] [Orig: Biosample_summary=Islet of Langerhans tissue;Lab=Jason Lieb, UNC;System=endocrine system;Submitted_track_name=wgEncodeOpenChromFairePanisletsPk.narrowPeak.bigBed] [Life stage: Unknown]
NGEN000293 ENCODE Download 195,298 54,633,264 peaks hg19 RCC 7860 Cell line EFO:0005707 Urinary ENCSR000DDB 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 3,272,259 9/19/12 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=RCC 7860;Lab=Jason Lieb, UNC;System=excretory system;Submitted_track_name=wgEncodeOpenChromFaireRcc7860Pk.narrowPeak.bigBed Renal Unknown ENCODE RCC 7860 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DDB] [Orig: Biosample_summary=RCC 7860;Lab=Jason Lieb, UNC;System=excretory system;Submitted_track_name=wgEncodeOpenChromFaireRcc7860Pk.narrowPeak.bigBed] [Life stage: Unknown]
NGEN000294 ENCODE Download 213,646 36,612,014 peaks hg19 Small intestine Tissue UBERON:0002108 Digestive ENCSR000DDC 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 3,162,051 9/19/12 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=Small intestine tissue male adult (60 years) and male adult (84 years);Lab=Jason Lieb, UNC;System=digestive system;Submitted_track_name=wgEncodeOpenChromFaireSmallintestineocPk.narrowPeak.bigBed Digestive Adult ENCODE Small intestine (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DDC] [Orig: Biosample_summary=Small intestine tissue male adult (60 years) and male adult (84 years);Lab=Jason Lieb, UNC;System=digestive system;Submitted_track_name=wgEncodeOpenChromFaireSmallintestineocPk.narrowPeak.bigBed] [Life stage: Adult]
NGEN000295 ENCODE Download 192,872 30,922,208 peaks hg19 Urothelium cell line Cell line EFO:0005913 Urinary ENCSR000DDE 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 2,837,395 3/21/11 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=Urothelium cell line;Lab=Jason Lieb, UNC;System=excretory system;Submitted_track_name=wgEncodeOpenChromFaireUrotsaPk.narrowPeak.bigBed Renal Unknown ENCODE Urothelium cell line (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DDE] [Orig: Biosample_summary=Urothelium cell line;Lab=Jason Lieb, UNC;System=excretory system;Submitted_track_name=wgEncodeOpenChromFaireUrotsaPk.narrowPeak.bigBed] [Life stage: Unknown]
NGEN000296 ENCODE Download 186,766 32,687,520 peaks hg19 Urothelium cell line Cell line EFO:0005913 Urinary ENCSR000DDD 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 2,773,167 3/21/11 8/10/18 Called peaks FAIRE-seq peaks Biosample_summary=Urothelium cell line treated with UT189 for 1 hour;Lab=Jason Lieb, UNC;System=excretory system;Submitted_track_name=wgEncodeOpenChromFaireUrotsaUt189Pk.narrowPeak.bigBed Renal Unknown ENCODE Urothelium cell line (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DDD] [Orig: Biosample_summary=Urothelium cell line treated with UT189 for 1 hour;Lab=Jason Lieb, UNC;System=excretory system;Submitted_track_name=wgEncodeOpenChromFaireUrotsaUt189Pk.narrowPeak.bigBed] [Life stage: Unknown]
Showing records 1 to 37 out of 37
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