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Description of FILER metadata columns (XLS): FILER_v1_metadata_schema.xlsx.

For descriptions of the main output data types and data terms, please see data glossary, data terms, and references therein. For additional information, please also see data Summary page (‘Data description’ tab) and the About page.

#Identifier Data Source Download file Number of intervals bp covered Output type Genome build cell type Biosample type Biosamples term id Tissue category ENCODE Experiment id Biological replicate(s) Technical replicate Antibody Assay File format File size Release date Date added to FILER Data Category Genomic feature type Track Description system category life stage trackName
NGEN024348 ENCODE Download 5 3,321 RNA-binding protein associated mRNAs hg19 HT1080 Cell line EFO:0002059 Connective Tissue ENCSR868RFZ 1 1_1 ELAVL1 Switchgear bed broadPeak 195 8/15/11 7/15/20 Called peaks Expression Switchgear protein RNA-binding protein associated mRNAs Biosample_summary=HT1080;Lab=Scott Tenenbaum, SUNY-Albany;Submitted_track_name=wgEncodeSunySwitchgearHt1080Elavl1RbpAssocRna.broadPeak.bigBed Skeletal Unknown ENCODE HT1080 (repl. 1) Switchgear ELAVL1 RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR868RFZ] [Orig: Biosample_summary=HT1080;Lab=Scott Tenenbaum, SUNY-Albany;Submitted_track_name=wgEncodeSunySwitchgearHt1080Elavl1RbpAssocRna.broadPeak.bigBed] [Life stage: Unknown]
NGEN024349 ENCODE Download 24 17,917 RNA-binding protein associated mRNAs hg19 HT1080 Cell line EFO:0002059 Connective Tissue ENCSR243TRN 1 1_1 IGF2BP1 Switchgear bed broadPeak 579 8/15/11 7/15/20 Called peaks Expression Switchgear protein RNA-binding protein associated mRNAs Biosample_summary=HT1080;Lab=Scott Tenenbaum, SUNY-Albany;Submitted_track_name=wgEncodeSunySwitchgearHt1080Igf2bp1RbpAssocRna.broadPeak.bigBed Skeletal Unknown ENCODE HT1080 (repl. 1) Switchgear IGF2BP1 RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR243TRN] [Orig: Biosample_summary=HT1080;Lab=Scott Tenenbaum, SUNY-Albany;Submitted_track_name=wgEncodeSunySwitchgearHt1080Igf2bp1RbpAssocRna.broadPeak.bigBed] [Life stage: Unknown]
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